Insertion junction: CLIP2.015695_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015695
Chromosome:chromosome 3
Location:5622140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185950 (1 of 1) IPR006642//IPR026319 - Zinc finger, Rad18-type putative // Zinc finger C2HC domain-containing protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGCATGTACGGCTACTGGGACAAGGTGTCGCTGGTGGGGTGCCCCAT
Internal bar code:TCGGGGGGAGGGCGCATCTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:911
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTTCATCAGGCTCTGG
Suggested primer 2:GCAGCCAAGTTCAACCACAG