Insertion junction: CLIP2.015706_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015706
Chromosome:chromosome 7
Location:4532141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343900 (1 of 2) IPR011038 - Calycin-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCAGCCCGCGCCCGTGTACCCGCAAGTGAGCATGCGTGTGCGCGTGCG
Internal bar code:ATGAGTTCTCCTGACCTAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1048
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGACACACACGCGTACAT
Suggested primer 2:CACACAAAAGCCCACATCCG