Insertion junction: CLIP2.015707_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015707
Chromosome:chromosome 10
Location:3405241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443950 (1 of 2) PF04564//PF05049 - U-box domain (U-box) // Interferon-inducible GTPase (IIGP) (IIGP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACTTGCCAGGGGCCGGCACGACCGAGTGCCCCGCCGCGCAGTACTTC
Internal bar code:CGTGTGCTTTATACCTGTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2096
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGAGCCTTTAGGTGGTG
Suggested primer 2:AACTGCTCTCATGCGAACCA