Insertion junction: CLIP2.015722_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015722
Chromosome:chromosome 4
Location:1273464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214850 (1 of 1) IPR000104//IPR000253 - Antifreeze protein, type I // Forkhead-associated (FHA) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGCGAGCCACGTGACAGCTGGCGGCGCCGCCAGTGCACCCGGCCGCA
Internal bar code:GCAACGATGGCGTACCCTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2592
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGGAGGAAGAGGAGGAG
Suggested primer 2:CTGCGCACATGAATACCTGC