Insertion junction: CLIP2.015750_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015750
Chromosome:chromosome 17
Location:4396027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730600 (1 of 6) 3.2.1.4 - Cellulase / Endoglucanase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCGCGTTCCAGTCACAGGGGGCGGCGTAGTTGGTGGCGCAGCTGCTG
Internal bar code:TACCGTACATGAAAGGCGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5757
LEAP-Seq percent confirming:73.8462
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:ATACGGTGTATTCGGTCGGC
Suggested primer 2:GTGCGTGTGTGTGTGTGTAC