Insertion junction: CLIP2.015757_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015757
Chromosome:chromosome 16
Location:1732987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654850 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGACTCGGCGGTAGCGGTAAATGGCGAAATTCTGAAGCGTGAGGGTG
Internal bar code:CGGGTATCCTCGGCCGTTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3601
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGCATTGAGGTAAGTGGG
Suggested primer 2:ATGACTGGTTGCCTGGGATG