Insertion junction: CLIP2.015768_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015768
Chromosome:chromosome 6
Location:1843123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263750 RPN15 component of lid subcomplex of 26S proteasome regulatory subunit; (1 of 2) PF05160 - DSS1/SEM1 family (DSS1_SEM1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTCTTTCTTCTTCAGGTCTTCCTGCAAGGTGTAGCAAGCGAGAAGGT
Internal bar code:CCGTCCTCCAAAAATGAAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3735
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGGAAGAGCTGGACCTA
Suggested primer 2:GCTCAGCCCAAATTGCCAAA