Insertion junction: CLIP2.015773_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015773
Chromosome:chromosome 3
Location:1888984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154800 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGGTGTTGGCTCGACGCGGCGAGGCGCAGCAGCTGCCGGCGCTGCCG
Internal bar code:CACGAAAAAGGCGTTTTACCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2780
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTATGTGCGTGTGTACC
Suggested primer 2:CCCCTGACCTGAGCCAAAAT