Insertion junction: CLIP2.015773_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015773
Chromosome:chromosome 17
Location:5796185
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741250 PHR1,PHR6 (1 of 1) 2.5.1.77 - 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; 7%252C8-didemethyl-8-hydroxy-5-deazariboflavin synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTTGGGGTTTGAACCGGGGCGGACGATTCGATGCGTCGAGGCAAGTT
Internal bar code:CGGAACGCGAACAACGACTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2360
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTTGACAGAGACCAAGT
Suggested primer 2:TACACAAAGGAAGACCCCGC