Insertion junction: CLIP2.015778_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015778
Chromosome:chromosome 1
Location:3001595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018850 EEP2 (1 of 4) K12603 - CCR4-NOT transcription complex subunit 6 (CNOT6, CCR4); Exonuclease-Endonuclease-Phosphatase superfamily protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCATGTCGGACGCGTGACGCCGCATGCACGGCACCGGCAGTGCGTGCT
Internal bar code:ACTTAGGGAAGATTGTATCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2146
LEAP-Seq percent confirming:67.9245
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGACGTTTGTTACCGGC
Suggested primer 2:GCCCGACAAGAGTTCGTACA