Insertion junction: CLIP2.015780_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015780
Chromosome:chromosome 1
Location:1939018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010750 RLS10 RegA/Rls-like protein; (1 of 1) IPR000104//IPR010919 - Antifreeze protein, type I // SAND domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGAGCCGCTCCCGCTTTGAGAAGGAGGGCGGCAGCACCACAGCCAAGT
Internal bar code:TATATCGTCTTTATTTTCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:77
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATGCAAGACACGGGTTT
Suggested primer 2:CCGCAACCATGGATGACAAC