Insertion junction: CLIP2.015791_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015791
Chromosome:chromosome 7
Location:5266869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349520 (1 of 1) PF00023//PF00069//PF13857 - Ankyrin repeat (Ank) // Protein kinase domain (Pkinase) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCGAGGCACACATACACGTAGGAGAGCACGCGCATGGAGGCTCATCC
Internal bar code:GTATGGATAGTGAGGGTAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCTATTAGCCACGCCCA
Suggested primer 2:AGTAGTGGCACGAACCTTGG