Insertion junction: CLIP2.015793_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015793
Chromosome:chromosome 4
Location:3864837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230340 FAP206 (1 of 1) PTHR21442:SF0 - UPF0704 PROTEIN C6ORF165; Flagellar Associated Protein 206 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACCAAGCTGAAACGGGCGGAGTACAGGTAGTCGAGGCGTTAGTTGCA
Internal bar code:ATGCGGCGTCAGTATATTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:781
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTGTTTGCAACTCCCCG
Suggested primer 2:ACTCCGCCTGCAAATGTGTA