Insertion junction: CLIP2.015802_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015802
Chromosome:chromosome 2
Location:1626847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085150 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAATGTACTAGCCCACGAAACCGACGGGTATGAATCCTATGACACGGGT
Internal bar code:TTTCGAGTGCGGAAGTTAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2629
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGCAGCAGACCTTACA
Suggested primer 2:CCTGGTCTTTGACGTCAGCT