Insertion junction: CLIP2.015811_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015811
Chromosome:chromosome 6
Location:3653416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278144 (1 of 13) PF01789 - PsbP (PsbP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGGGGGCGGGGAGGAGAGGGGTACGAAGTTGAAGCCGGGAGGCTGGCG
Internal bar code:AAGCGACCCGAACGGGGCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4916
LEAP-Seq percent confirming:99.3289
LEAP-Seq n confirming:148
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:149

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTTGAAGAGTGGGAGGC
Suggested primer 2:CTGTCTTTGCAACCTGGTGC