Insertion junction: CLIP2.015823_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015823
Chromosome:chromosome 8
Location:4171297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383650 NUP85 Nucleoporin 85; (1 of 1) K14304 - nuclear pore complex protein Nup85 (NUP85) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTGCGGGGTGGTGGCGGTGGTGTGTGTGTGCAAGTGCGCAAGTTATG
Internal bar code:GCGCCGGTCGCACCCTAGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:184
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGCTGTTCTTCGTGGAC
Suggested primer 2:GAACACTGCACACACACACC