Insertion junction: CLIP2.015828_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015828
Chromosome:chromosome 6
Location:5303720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284700 AAT2 Alanine aminotransferase; (1 of 1) K00814 - alanine transaminase (GPT, ALT) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGGATGGGCACCATCATGGCGTCCGTCTGGGGCGGGGGGAGGGGAGG
Internal bar code:ATATATGCAAATTTCGCGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:257
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCTACATGACCGACGGC
Suggested primer 2:CCTTCGGTGTAGTTTGGGCT