Insertion junction: CLIP2.015835_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015835
Chromosome:chromosome 2
Location:3524737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099100 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP); RCC-type HECT ubiquitin ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGGCTTGCTCTGTCAGTCAATGTGCTCGGCGCAGGCTCCGAACCTCG
Internal bar code:ATGAGCCTGATATAGGGGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2444
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGAAGCCTCAAGACGCAT
Suggested primer 2:CTTGTGCTTTCCTCACACGC