Insertion junction: CLIP2.015836_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015836
Chromosome:chromosome 12
Location:5742587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801436 (1 of 5) PTHR10037//PTHR10037:SF62 - VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM // SODIUM CHANNEL PROTEIN PARA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTGCAAGCTCCGGCCGTCCTAAGCCCAACCGGGCGGCCGCACGCAGC
Internal bar code:TATGACTCATATTACAGGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3799
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTGACAACTTCGGCGTT
Suggested primer 2:GTGTTGACGATGATGAGCGC