Insertion junction: CLIP2.015836_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015836
Chromosome:chromosome 12
Location:5742588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801436 (1 of 5) PTHR10037//PTHR10037:SF62 - VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM // SODIUM CHANNEL PROTEIN PARA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGAGCAGCGCCTGTCTTGGCGGCACGTGCTGTCTCCACGTCCTCCTC
Internal bar code:TATGACTCATATTACAGGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:417
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGACGATGATGAGCGC
Suggested primer 2:GCTTTGACAACTTCGGCGTT