Insertion junction: CLIP2.015845_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015845
Chromosome:chromosome 13
Location:2869477
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583150 (1 of 2) IPR000104//IPR000210//IPR011333 - Antifreeze protein, type I // BTB/POZ domain // POZ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCTGCAGCACCCACACCAGCCGCGGCCGCACGAGCTGCGGCCGCTGC
Internal bar code:TTACTTATTTGTTACGTGGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:497
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGTAGGCTACCACGTGC
Suggested primer 2:GTGGACTGGGAAGACAGACG