Insertion junction: CLIP2.015863_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015863
Chromosome:chromosome 1
Location:5118077
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035750 MSC3 Mechanosensitive ion channel; (1 of 3) PTHR30566 - YNAI-RELATED MECHANOSENSITIVE ION CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAAGTAGGCCCGCCAGTCACCGCACAATCGCACGAGTCCCCTCGGCTG
Internal bar code:GTCATCCTGCATCGTTCGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2291
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGACCCTACCTCCTTCA
Suggested primer 2:GCTGGAGGAGATGACGATGG