Insertion junction: CLIP2.015868_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015868
Chromosome:chromosome 6
Location:4260490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278253 (1 of 44) IPR000048 - IQ motif, EF-hand binding site CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGTGCGGAGGATGCTGCTGCTGGCCGGAGCTGGCAGGCGGCGGAGGC
Internal bar code:GAAGTGCAGGCGATCGGAACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1294
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATAGAACATTGGTGCCG
Suggested primer 2:CAATGGTGGTTGTGCTGGTG