Insertion junction: CLIP2.015878_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015878
Chromosome:chromosome 15
Location:1778350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00246699

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGGCGCTTACTTGTGGCTTGCCGCTGACACCACCGCCGCGCCCGCCA
Internal bar code:ACTCAGAATTGATCGAGGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1280
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGAGCAATAGCCATGC
Suggested primer 2:GTTGACATAGGCAGGGTGCT