Insertion junction: CLIP2.015881_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015881
Chromosome:chromosome 3
Location:6124582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190550 (1 of 1) PF08638 - Mediator complex subunit MED14 (Med14) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTAGGGGCATGCAACACCGGCACATGGCAGACGGGTACTGACAGTTAG
Internal bar code:AGTCGTGGCTATGATGTACCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:414
LEAP-Seq percent confirming:12.1212
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTGCTCATTGCTAATGG
Suggested primer 2:AGGCGAGAACAATTCGGGTT