Insertion junction: CLIP2.015881_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015881
Chromosome:chromosome 5
Location:3177838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232050 (1 of 37) IPR008979 - Galactose-binding domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGATGAGACATACGGTAGTTAGGCGGCGGCATGGTAAGTAGGATGATA
Internal bar code:TACTCTAAAAGTCTAGTGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1410
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGATGGATGGATGTCGCC
Suggested primer 2:ACATTGCGGAGAGAAGTGCA