Insertion junction: CLIP2.015889_5

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015889
Chromosome:chromosome 14
Location:3740782
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g631650 FAP406 Flagellar Associated protein 406 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAGAAATCGAGTCGAAACCGTGGGTTATATGGAGACTTGCGTGCTGA
Internal bar code:TGCTAAGGTCAGATGTTAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3444
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TACATGAGAGGGCGTCTGGA
Suggested primer 2:CGCTCATGCAACTCCATTCG