Insertion junction: CLIP2.015905_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015905
Chromosome:chromosome 14
Location:661097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g612200 CYG16 (1 of 2) IPR001054//IPR003018//IPR029016//IPR029787 - Adenylyl cyclase class-3/4/guanylyl cyclase // GAF domain // GAF domain-like // Nucleotide cyclase; Adenylate/guanylate cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAAAACACAGATTAAGAGGTGCGCGACAGGAGCAGCTTCAGCCGTTG
Internal bar code:GATCTCTTTGTTTCTTGCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:501
LEAP-Seq percent confirming:21.7391
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCACGTAGTCTGTGCCC
Suggested primer 2:CCCCGCACCTTTTTGAACTG