Insertion junction: CLIP2.015910_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015910
Chromosome:chromosome 12
Location:4727433
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522850 HEL55 (1 of 1) K12835 - ATP-dependent RNA helicase DDX42 (DDX42, SF3B125); DEAD/DEAH box helicase similar to Eukaryotic Initiation Factor 4A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGATTCCGGAATGAAGTAACCCCCACCATCCGCCCACCATCACCTCT
Internal bar code:TTCATGTTAATTCCTACCACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:90
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCACAGGCAGATTGGACG
Suggested primer 2:CTGCTGCTGCCCGTATCATA