Insertion junction: CLIP2.015923_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015923
Chromosome:chromosome 3
Location:1619935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152550 (1 of 1) IPR000104//IPR001680//IPR011041//IPR015943//IPR017986//IPR020472//IPR027417 - Antifreeze protein, type I // WD40 repeat // Soluble quinoprotein glucose/sorbosone dehydrogenase // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain // G-protein beta WD-40 repeat // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATAGGTGTGCAAGCATACGACCTCATTTGACGCGGAATGTCGAGGCG
Internal bar code:GGACTTACCTGGGCAAGGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2026
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCACGGAGGTTACTTCT
Suggested primer 2:GACTGAAACCGAGCCTGACA