Insertion junction: CLIP2.015926_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015926
Chromosome:chromosome 3
Location:5530296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185000 GTR8,BGS2,CALS2 Callose synthase 2; (1 of 2) K11000 - callose synthase [EC:2.4.1.-] Glc b1-3 Glc (CALS) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCCTGCTGCGGCGGCAGGAGGAGACGAGCCGCAGCGTGAGGCGGCGTT
Internal bar code:GGTTGGCTTTTTTTCCATAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1915
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATTGCCAGGACAAGTGA
Suggested primer 2:ACTCGCCCACATTCTACAGC