Insertion junction: CLIP2.015931_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015931
Chromosome:chromosome 16
Location:2349254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659100 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAGTCAGGTGACAGCCGAAACGAGCAGCAGCCGCTGCCCAGAGGTTCC
Internal bar code:TTTCGGGCATGATATAGACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:946
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTCCTTCCTTGTGCTCT
Suggested primer 2:CTCCTCGTCATCCACCATCG