Insertion junction: CLIP2.015939_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015939
Chromosome:chromosome 2
Location:5968194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118200 (1 of 3) PF01940 - Integral membrane protein DUF92 (DUF92) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTGTAAGATGCAACATAGGCATGATACGGGCACGCAAGAGTCAGCTT
Internal bar code:AATTTGATCCCTACCCGTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3910
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCCCCTTGTCTTCCCCTG
Suggested primer 2:TAGGTGGTGCAGAGAAAGCG