Insertion junction: CLIP2.015944_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015944
Chromosome:chromosome 3
Location:2370604
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158400 FAP218 Flagellar Associated Protein 218; (1 of 1) IPR023160 - Ribonuclease HII, helix-loop-helix cap domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAGTCGCGTCATTACAAACGGCTGCGTAGGCATTGCGTCGCCTTCTG
Internal bar code:CTAGGGGCGGTTCACGGGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:951
LEAP-Seq percent confirming:12.3288
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:64
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCTGAGTCTTGCAGCAGT
Suggested primer 2:CACAAACATGGGCACACAGG