Insertion junction: CLIP2.015948_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015948
Chromosome:chromosome 11
Location:766786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467629 (1 of 28) PTHR31600//PTHR31600:SF2 - FAMILY NOT NAMED // TINY MACROCYSTS PROTEIN B-RELATED 3'UTR
Cre11.g467630 AMI2 putative amidase; (1 of 2) 3.5.1.4 - Amidase / Acylase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCACTATCTTGTCCGCTCCCCCTCTTGGGAGGGAAAATCACCATCTA
Internal bar code:AGCGGCCGGATTCTGGTTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1159
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGACAGTGATTGCTGCT
Suggested primer 2:AACTGCGTGCGCTACTTAGT