Insertion junction: CLIP2.015952_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015952
Chromosome:chromosome 5
Location:1924725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236050 (1 of 2) IPR015097 - Lung surfactant protein D coiled-coil trimerisation CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTGGAGGGCCGCGAGCGGCGGTCAGATGAGGCTGCTCGCGCGGCACA
Internal bar code:AGGATAGACGTTGTGGTTTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:3247
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTACGGTGTAGGCGATG
Suggested primer 2:GACTTCTCAGCGGGTGTGAA