Insertion junction: CLIP2.015954_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015954
Chromosome:chromosome 2
Location:7958100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145250 RPS27-B,RPS27E2,RPS27e2 (1 of 2) K02978 - small subunit ribosomal protein S27e (RP-S27e, RPS27); Cytosolic 80S ribosomal protein S27, isoform B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACAGTGGGGCCATAGCTTGGCGTGGGGCAGGTCACTCTGTTTGGCGGG
Internal bar code:TATTGAACCCTCGGTGTACAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2433
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCCTCCAATGCAACGAC
Suggested primer 2:AGTTGGAGCATCGCTTCCAA