Insertion junction: CLIP2.015959_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015959
Chromosome:chromosome 1
Location:5222687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036550 ERV14 (1 of 1) PTHR12290:SF11 - PROTEIN CORNICHON; Cornichon-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGGAGGGTGCGCCCATGCACGAGCCGCTCGCCAGATCGCACGTGTGC
Internal bar code:TTTTGTTAACACGGGTGAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1961
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TAGAATGGCAGGAGGGCTCT
Suggested primer 2:GCCCCGTGTAATCCCTTTCA