Insertion junction: CLIP2.015962_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015962
Chromosome:chromosome 3
Location:4645303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177007 (1 of 1) PTHR12480:SF6 - JMJC DOMAIN-CONTAINING PROTEIN 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGCAGAAAACAAAAACAGCACACAAACCAAAACACGCAGCACGCGAC
Internal bar code:GCGGGGCTTTTCAGGACTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:369
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGAGAAGAGGCAGGAG
Suggested primer 2:GCAGCAGACCTGTACCACAT