Insertion junction: CLIP2.015978_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015978
Chromosome:chromosome 14
Location:1763687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619300 CYN16 Cyclophilin 16; (1 of 60) 5.2.1.8 - Peptidylprolyl isomerase / Rotamase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCATGCGAGTGTCCTACAACGTTCCCAGGCACTCCTAACCCGAATAGC
Internal bar code:TAATACGGAAAGATATAACGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3135
LEAP-Seq percent confirming:93.8144
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGTGTTGGTGGTTGTG
Suggested primer 2:CTACGGCGGGCAATTCAATG