Insertion junction: CLIP2.015992_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015992
Chromosome:chromosome 12
Location:9176494
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543300 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGGGGCTGCTGCTAACCTGCGCCGGCGCGCTACAGCGGTTGCCGCGG
Internal bar code:TCGCCTCCATTCGTAGATGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1749
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAAGCGGAGAGGGAGAG
Suggested primer 2:CTAGCTCGCTAACCATCGCA