Insertion junction: CLIP2.015997_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015997
Chromosome:chromosome 4
Location:1549667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213450 VPS2A Subunit of the ESCRT-III complex; (1 of 1) K12191 - charged multivesicular body protein 2A (CHMP2A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCTGTCCTTCGCCCCCACGGCGCTCCCCGTGCCCCCTTCCCATCAGA
Internal bar code:GAAACTACAGCGAGGCGTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2900
LEAP-Seq percent confirming:98.9691
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:TACAAGCCAAACTGCAACGC
Suggested primer 2:CTGCAGCTCGCTTTTGAGTC