Insertion junction: CLIP2.015999_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015999
Chromosome:chromosome 13
Location:2705819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581700 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGACTTCACTGCTCTCGTGCCAGATGGCCACTCAAGCAGCTTGCTGTG
Internal bar code:CTCCTTGATCTGAGGGTTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1517
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGAACAACGCCAAGGCA
Suggested primer 2:AGAACAAGCTGAGGCAACGA