Insertion junction: CLIP2.016007_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016007
Chromosome:chromosome 1
Location:6631778
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047229 (1 of 1) PTHR14894:SF0 - CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCGGCTCTGGTGGCGCGGTGCCGGCGGCTCAAAGGGGTGGTGGAGCG
Internal bar code:GTGCTTCGAGGATCAATGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:935
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTAACCTCGCAGGACACCAC
Suggested primer 2:TTATGGACGGCTACTCCCCA