Insertion junction: CLIP2.016009_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016009
Chromosome:chromosome 12
Location:3728038
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514100 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATCTTGGGGAACAGCAATCGTTACCACGACGTCGACCAGCTCCAGCAG
Internal bar code:CAGCACCTCGTTGGGGTGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2306
LEAP-Seq percent confirming:91.4286
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGATTGTGGAGACGGGA
Suggested primer 2:CCACCAGTGTTTGCTTCACG