Insertion junction: CLIP2.016012_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.016012
Chromosome:chromosome 9
Location:2804306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391050 CYA9 Adenylate cyclase; (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACACAGCCTGCTACAGCTGCCAACATGGCGCACTGCATGTTTTCGGG
Internal bar code:TTTTCCGGGCGGGTATGAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1726
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAAAGACGGATGCATGA
Suggested primer 2:TGTCTTTCGACCCAAGTCCG