Insertion junction: CLIP2.016014_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016014
Chromosome:chromosome 3
Location:344288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144607 (1 of 79) IPR011992 - EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGCTCCTCCGTGCTCGCGCCTGTAGCGGATTGCTGCCGGTAATAGCG
Internal bar code:CCGTGTATATAACATTAGCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:605
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCAGACACAGTCGACACA
Suggested primer 2:GGTGGCGGTTTTGACTCAAC