Insertion junction: CLIP2.016020_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016020
Chromosome:chromosome 7
Location:128296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313000 (1 of 2) 2.7.7.48 - RNA-directed RNA polymerase / RNA nucleotidyltransferase (RNA-directed) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCCGTATATTCACACCCCTCCCCCCCCTCCCGCCACTCGTACCAGCA
Internal bar code:AGCTTAAGTATGCGTTAAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:937
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTTATGGGGGTGAGTGGTGG
Suggested primer 2:CACCTCTCTCTGTGTGCCTG