Insertion junction: CLIP2.016021_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016021
Chromosome:chromosome 6
Location:7396350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g300200 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCGCAGAAGCGATGGAACGGTGAGCCAAGGAGAACGGAGCCCTTAC
Internal bar code:GTTTACGGCGTGGAAGTGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1096
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGGCGTCACTGGTGTAG
Suggested primer 2:GCGAAAGAAGGTCCTGGTGA