Insertion junction: CLIP2.016022_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016022
Chromosome:chromosome 12
Location:4739390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523000 (1 of 1) K15308 - tristetraprolin (TTP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGGTAGGGACGGCAAGGCAAGCGACAAACGTACGAGACAGCAGCATAC
Internal bar code:ATTTCACTAAGTAGAATTCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:999
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACCGGGAATAAGGGCCT
Suggested primer 2:CGCTGATAAAACGCGTGAGG